rs13392139 chr2:120821192 A>G
- Sequence
tttcctggggcctctgtacggggg[A/G]ggttctctcgagttgcaaaggtgc
- ASB in cell types
- K562 (myelogenous leukemia) BJ1-hTERT (Human fibroblast telomerase immortalized cell line)
- ASB for transcription factors
- EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | 2.27 | -1.43 | 1.50 | -4.25 | Concordant |
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Motif analysis
