rs13400819 chr2:186516249 T>G

Sequence
agtcatcttaagcttgtctctatt[T/G]tatctatatttacatagtttttat
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.73 -4.33 3.7·10-41.00 2.00 -1.31 Weak Concordant
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Motif analysis

ANDR_HUMAN Weak Concordant
ANDR_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration years of education
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Breast_Mammary_Tissue Cells_Cultured_fibroblasts Heart_Atrial_Appendage Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg

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