rs13402 chr12:6753008 C>G
- Sequence
cccggtacgctgcagggtcagggt[C/G]gcggcccggaacgtggggattggt
- ASB in cell types
- breast tumor foreskin keratinocyte adult erythroblasts CD14+ monocytes
- ASB for transcription factors
- ESR1_HUMAN RBBP5_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.88 | -5.39 | 2.00 | 2.76 | Discordant | |||
| RBBP5_HUMAN | 2.67 | n/a | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | 1.95 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
