rs1340690 chr1:76040569 A>G
- Sequence
tggtccagggtagctcgtcttatc[A/G]gtgctgctgcaggcactccctgct
- ASB in cell types
- HEK293 (embryonic kidney) CD34+ hematopoietic stem cells-derived proerythroblasts
- ASB for transcription factors
- ZN610_HUMAN TAL1_HUMAN ZN692_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN610_HUMAN | 3.68 | n/a | 2.00 | n/a | n/a | |||
| TAL1_HUMAN | 3.11 | n/a | 2.00 | -1.94 | Weak Concordant | |||
| ZN692_HUMAN | 2.56 | n/a | 2.00 | n/a | n/a |
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Motif analysis
