rs135572 chr22:46131362 T>G

Sequence
gccagggctgacgccaccgtaagg[T/G]tacagggcaggggtcactcctgct
ASB in cell types
GM12891 (male B- cells lymphoblastoid cell line) HT1080 (fibrosarcoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12891 (male B- cells lymphoblastoid cell line) 1.83 -3.15 0.011.00 1.33
HT1080 (fibrosarcoma) 1.58 -0.48 0.021.00 2.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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