ADASTRA v5.1.3
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rs135573
chr22:46131359
A
>
G
Sequence
ggtgccagggctgacgccaccgta[A/G]ggttacagggcaggggtcactcct
ASB in cell types
HT1080 (fibrosarcoma)
GM12891 (male B- cells lymphoblastoid cell line)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HT1080 (fibrosarcoma)
1.61
-0.44
0.01
1.00
2.00
GM12891 (male B- cells lymphoblastoid cell line)
1.76
-3.22
0.03
1.00
1.42
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
EMBL-EBI
epithelial ovarian cancer
GTEx eQTL
Esophagus_Mucosa
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale