rs135573 chr22:46131359 A>G

Sequence
ggtgccagggctgacgccaccgta[A/G]ggttacagggcaggggtcactcct
ASB in cell types
HT1080 (fibrosarcoma) GM12891 (male B- cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HT1080 (fibrosarcoma) 1.61 -0.44 0.011.00 2.00
GM12891 (male B- cells lymphoblastoid cell line) 1.76 -3.22 0.031.00 1.42
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Motif analysis

No data available

Genetic associations

EMBL-EBI epithelial ovarian cancer
GTEx eQTL Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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