rs1357821 chr7:12742437 C>T

Sequence
aatcctgcagtagttctccttctg[C/T]gattggcttattgcacttagtata
ASB in cell types
iPSC (induced pluripotent stem cells)
ASB for transcription factors
DUX4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
DUX4_HUMAN -2.74 3.05 1.002.8·10-4 1.00 4.78 Concordant
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Motif analysis

DUX4_HUMAN Concordant
DUX4_HUMAN pic

Genetic associations

GRASP birth weight,  body mass index (bmi),  cystatin c in serum,  hdl cholesterol,  hdl cholesterol change with statins,  height,  resistance to kuru in aged women despite likely exposure,  triglycerides,  triglycerides change with statins
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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