rs13728 chr1:230280472 T>C
- Sequence
tataagacataccccatagctctg[T/C]gtgagccagcaataccgctgcccc
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM18951 (B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.84 | 1.34 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP age at death with kuru exposure, college completion, hdl cholesterol, hip bone mineral density (bmd), infant head circumference