ADASTRA v5.1.3
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rs137626
chr22:39320266
A
>
G
Sequence
gagggctttcgctgatctctgcct[A/G]ggctccagggtgactcggatcctg
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells)
primary B-CLL cells
GM02255 (Lymphoblastoid Cell Lines)
ASB for transcription factors
TCF21_HUMAN
BRD4_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN
n/a
3.79
1.00
1.5·10
-5
2.00
n/a
n/a
BRD4_HUMAN
0.05
1.55
1.00
0.02
1.33
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Brain_Cerebellum
,
Heart_Atrial_Appendage
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)