ADASTRA v5.1.3
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rs138373
chr22:38398655
G
>
A
Sequence
ccggccccccaaaagacacgggga[G/A]ccgcaagcgaggggtgcagccatc
ASB in cell types
HEK293 (embryonic kidney)
GM02610 (Lymphoblastoid Cell Lines)
SUM159PT (Triple negative breast cancer)
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.20
0.87
1.00
6.8·10
-5
1.95
GM02610 (Lymphoblastoid Cell Lines)
2.15
-0.21
9.6·10
-3
1.00
1.00
SUM159PT (Triple negative breast cancer)
1.48
-0.95
0.02
1.00
1.00
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Lung
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale