rs138543505 chr8:70669405 G>C
- Sequence
gaaggctggcgcgaggcgtgaggt[G/C]gcgtgaggcgaagctggaatctgc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- BHE40_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | n/a | 0.85 | 1.33 | 5.30 | Concordant | |||
| COT1_HUMAN | -2.13 | 2.27 | 1.00 | n/a | No Hit |
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Motif analysis
