rs138774 chr22:35312806 G>A
- Sequence
aggaagggggtacagctgactgtg[G/A]ctgacgccagcccctggagagttc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- MEF2B_HUMAN IKZF1_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | 2.83 | -2.70 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.80 | -0.20 | 1.44 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.64 | -1.25 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP diastolic blood pressure (dbp), fasting blood glucose, fasting insulin, homa-ir, ldl cholesterol, systolic blood pressure (sbp), total cholesterol, triglycerides, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood