rs139031 chr22:43260934 G>C

Sequence
caaactcctccttgtagtgcttgt[G/C]tcagatgtactatggggtcaggga
ASB in cell types
liver
ASB for transcription factors
RXRA_HUMAN HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RXRA_HUMAN 2.65 n/a 6.5·10-31.00 1.00 n/a No Hit
HNF4A_HUMAN 2.12 -1.78 0.051.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol mitral annular calcium triglycerides
GTEx eQTL Colon_Sigmoid

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