rs13951 chr1:116988998 G>A

Sequence
caagtgagaattaaagagagaaca[G/A]atatttaaacaggtgctgtattag
ASB in cell types
VCaP (prostate carcinoma) LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -1.74 2.53 1.000.03 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease triglycerides
GTEx eQTL Artery_Aorta Brain_Cerebellum Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Whole_Blood

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