rs139522101 chr7:149127697 A>T

Sequence
cgccactgcactccagcctgggcg[A/T]cagagggagactccatctcaaaaa
ASB in cell types
GM02255 (Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines) 2588 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 3.02 -1.71 5.0·10-101.00 1.22 -0.32 Weak Concordant
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Brain_Cerebellum Esophagus_Mucosa

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