rs139534837 chr15:72272805 G>C

Sequence
gctagtcgggaaagggtgcggagt[G/C]gggggtggcgcctgcgccgtgggt
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
GLIS1_HUMAN TYY1_HUMAN ZN148_HUMAN ZN398_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN 1.93 n/a 1.1·10-41.00 1.33 n/a n/a
TYY1_HUMAN 1.35 -0.18 1.1·10-31.00 1.00 n/a No Hit
ZN148_HUMAN -2.57 2.79 1.000.02 1.00 n/a n/a
ZN398_HUMAN 0.89 -0.89 0.031.00 1.00 n/a n/a
ZFX_HUMAN -0.33 1.42 1.000.04 1.00 n/a No Hit
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Motif analysis

ZSC22_HUMAN Weak Discordant
ZSC22_HUMAN pic

Genetic associations

No data available

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