rs140199 chr22:23984592 T>C
- Sequence
aaatgtgacagtagatgtcactgc[T/C]gaccaataaacaggatgttccaga
- ASB in cell types
- KMS-11 (Plasma cell myeloma) HEK293 (embryonic kidney) MCF10AT1 (breast premetastatic epithelial cells) epithelial cell of prostate
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.37 | -0.38 | 1.94 | n/a | No Hit | |||
| STAG1_HUMAN | 0.81 | n/a | 2.00 | n/a | n/a |
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