rs140255238 chr5:173284071 C>T
- Sequence
ggggcgcgtcccggtaaaccagaa[C/T]ctcagcccatcaactcactcgtgg
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.13 | 1.73 | 2.00 | n/a | n/a | |||
| SMC3_HUMAN | 0.13 | 1.85 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | -0.05 | 1.60 | 2.00 | n/a | No Hit |
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