rs141808443 chr3:25033629 A>C
- Sequence
caagaagagctccccctggaggac[A/C]gcaaggtcaagccagacccacatc
- ASB in cell types
- SK-N-SH (neuroblastoma) GSC23 (Glioblastoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.91 | -0.10 | 1.08 | -1.56 | Weak Concordant |
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Motif analysis
