rs141990636 chr17:51540442 T>C
- Sequence
tggtgacttgtgccatcttgtggt[T/C]agacttcctggaaccccagaagga
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.16 | 2.23 | 2.50 | 1.88 | Weak Concordant |
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Motif analysis
