rs142290949 chr1:58752726 C>A

Sequence
tgtgatccacccaccttggcctcc[C/A]aaagtgctgggattactggcatga
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ATF3_HUMAN ARI1B_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF3_HUMAN 1.66 n/a 8.8·10-41.00 4.00 n/a No Hit
ARI1B_HUMAN 2.56 n/a 4.2·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Colon_Transverse,  Esophagus_Mucosa,  Muscle_Skeletal,  Thyroid,  Whole_Blood

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