rs142799075 chr10:41884509 A>T
- Sequence
gaatggaatggaatgcaatttaat[A/T]aaatggaatggaatcaaccagagt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) HEK293T (embryonic kidney) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- RING2_HUMAN ANDR_HUMAN PKNX1_HUMAN PRDM4_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RING2_HUMAN | -3.35 | 3.39 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | -2.26 | 3.12 | 2.00 | n/a | No Hit | |||
| PKNX1_HUMAN | n/a | 3.24 | 2.50 | n/a | No Hit | |||
| PRDM4_HUMAN | n/a | 3.23 | 3.00 | n/a | n/a | |||
| CTBP1_HUMAN | n/a | 2.53 | 2.75 | n/a | n/a |
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