rs143506917 chr18:8647557 G>A
- Sequence
gtgcagcaatctttgctgttctgc[G/A]gcctctgctggtgatactcaggca
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.64 | -2.58 | 1.00 | -3.36 | Concordant | |||
| STAG1_HUMAN | 2.98 | n/a | 1.00 | n/a | n/a |
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Motif analysis
