rs1438990 chr12:90280967 A>G
- Sequence
tgccgtgattgtaagtttcctgag[A/G]cctctcaagccatgctgaactgtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM02610 (Lymphoblastoid Cell Lines) GM01310 ( Transformed lymphovlasoid cell line )
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.19 | -1.50 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.59 | -1.10 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | 2.22 | 0.33 | 1.00 | n/a | n/a |
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