rs144122196 chr16:73016213 C>A
- Sequence
tctcccactcctgcatgtttgttg[C/A]cacttccccattttgtgttaacaa
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CEBPA_HUMAN SOX13_HUMAN TBX3_HUMAN BCL6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPA_HUMAN | n/a | 3.82 | 2.00 | n/a | No Hit | |||
| SOX13_HUMAN | n/a | 3.96 | 2.00 | n/a | n/a | |||
| TBX3_HUMAN | n/a | 3.07 | 2.00 | -0.79 | Weak Discordant | |||
| BCL6_HUMAN | n/a | 3.66 | 2.00 | n/a | No Hit | |||
| HNF1A_HUMAN | n/a | 3.35 | 2.00 | n/a | No Hit |
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Motif analysis
