rs144135113 chr1:223992676 G>T
- Sequence
cggaaggcgcgctcttgtgacgtc[G/T]cagggaactaccactcacgcagag
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) HepG2 (hepatoblastoma) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- ZN189_HUMAN ZBT21_HUMAN TYY1_HUMAN ATF2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN189_HUMAN | 2.35 | n/a | 2.00 | n/a | n/a | |||
| ZBT21_HUMAN | 0.70 | n/a | 4.00 | n/a | n/a | |||
| TYY1_HUMAN | 1.30 | -0.63 | 3.33 | n/a | No Hit | |||
| ATF2_HUMAN | 1.25 | n/a | 4.00 | -0.52 | Weak Concordant | |||
| ZNF10_HUMAN | 2.91 | n/a | 2.00 | n/a | n/a |
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Motif analysis
