rs144817752 chr8:42153086 G>C
- Sequence
tgtccgcgcctaggagcagtgggc[G/C]ctgagagcagcaaggccaggtgag
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- NELFE_HUMAN RBM25_HUMAN ANDR_HUMAN NELFA_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NELFE_HUMAN | 2.38 | -5.22 | 2.00 | n/a | n/a | |||
| RBM25_HUMAN | 0.66 | -0.06 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.90 | n/a | 2.00 | n/a | No Hit | |||
| NELFA_HUMAN | 1.71 | -3.07 | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | 1.77 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Ovary, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Thyroid