rs145956624 chr17:41689381 A>C
- Sequence
ccattgcgtcacgtccgttacgtc[A/C]ccacccgttgtcacggatccggag
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293T (embryonic kidney) monocytes from periferal blood primary B-CLL cells
- ASB for transcription factors
- SRBP2_HUMAN ZN600_HUMAN BRD4_HUMAN JUN_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | 2.43 | -0.84 | 2.75 | 1.91 | Weak Discordant | |||
| ZN600_HUMAN | n/a | 1.96 | 2.00 | n/a | n/a | |||
| BRD4_HUMAN | 3.02 | n/a | 3.00 | n/a | n/a | |||
| JUN_HUMAN | 0.21 | 1.43 | 3.00 | n/a | No Hit | |||
| ZSC18_HUMAN | 2.63 | -2.67 | 1.00 | n/a | n/a |
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Motif analysis
