rs1477787 chr17:27447333 T>C

Sequence
gatcctctgttcatatttcacata[T/C]atgtgtaatatatgtgactataaa
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
REQU_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REQU_HUMAN -0.93 1.97 1.000.05 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd body mass index (bmi) hdl cholesterol
GTEx eQTL Adipose_Visceral_Omentum Brain_Cerebellum Cells_Cultured_fibroblasts Esophagus_Mucosa Testis Whole_Blood

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