rs149249 chr7:74173331 T>C
- Sequence
actccagaggctaaggcggcagga[T/C]ggcatgagcccaagaggtcaaggc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF3_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | -2.24 | 2.60 | 1.00 | n/a | No Hit | |||
| COT1_HUMAN | 0.61 | 2.60 | 1.00 | n/a | No Hit |
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