rs150088 chr1:28936021 A>G
- Sequence
cctagtatacttctcattattaaa[A/G]gtttgtctctcatatccttcttac
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.67 | 0.82 | 1.02 |
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Motif analysis
No data available
Genetic associations
GRASP childhood acute lymphoblastic leukemia, hypertension (early onset hypertension), total cholesterol, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Testis, Thyroid