rs150163802 chr1:8007735 C>A
- Sequence
ccaggctggtctcaagctcccaac[C/A]tcaggtgatccgcccgcctcggcc
- ASB in cell types
- HCT-116 (colon carcinoma)
- ASB for transcription factors
- PEX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PEX2_HUMAN | 2.57 | -1.04 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Colon_Transverse, Muscle_Skeletal, Pancreas, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid