ADASTRA v5.1.3
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Bill Cipher
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs150298
chr15:89399809
G
>
A
Sequence
ctactcctctggcccggagaccca[G/A]gacctcgtccgcactccaactctc
ASB in cell types
GM23248
PANC1 (pancreatic ductal adenocarcinoma)
GM12878 (female B-cells lymphoblastoid cell line)
22RV1 (prostate carcinoma)
ASB for transcription factors
EZH2_HUMAN
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EZH2_HUMAN
0.01
1.77
1.00
5.8·10
-4
1.28
n/a
n/a
CTCF_HUMAN
1.40
0.61
0.05
1.00
1.24
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
aortic valve calcium
,
cystatin c in serum
,
infant head circumference
GTEx eQTL
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Muscularis
,
Lung
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)