rs150509 chr17:34412623 T>C
- Sequence
aaaaataaataccaaaaggaaagc[T/C]acggcatccgttacgtctgtctca
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma)
- ASB for transcription factors
- MTG16_HUMAN GATA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | 2.41 | -4.87 | 2.00 | n/a | n/a | |||
| GATA1_HUMAN | 1.68 | -0.79 | 2.00 | n/a | No Hit |
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