rs151077602 chr12:110418319 C>T

Sequence
ttgtgatccgcccgcctcggcctc[C/T]caaagtgctgggattacaggcgtg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
PRDM6_HUMAN ZBT17_HUMAN ZN366_HUMAN ZBT8A_HUMAN
Search SNPs nearby
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM6_HUMAN n/a 3.53 1.007.2·10-9 2.00 n/a No Hit
ZBT17_HUMAN n/a 2.51 1.005.9·10-3 2.00 n/a No Hit
ZN366_HUMAN n/a 3.00 1.000.01 2.00 n/a n/a
ZBT8A_HUMAN n/a 3.00 1.000.02 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Lung,  Small_Intestine_Terminal_Ileum,  Thyroid

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