rs1512097 chr4:26161235 T>C
- Sequence
gtcgtctgctggagggtgacaggc[T/C]acatggggcagaaatgagccatcc
- ASB in cell types
- GM12891 (male B- cells lymphoblastoid cell line) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.11 | 2.88 | 1.19 | 3.85 | Concordant |
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Motif analysis
