rs1517906 chr11:76920285 T>C
- Sequence
tagcatcccctgcccacctacctc[T/C]ccgctctatgggattagctttagc
- ASB in cell types
- A549 (lung carcinoma) NB69 (neuroblastoma) IMR-5 (Neuroblastoma) glioblastoma cells
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.70 | 0.69 | 1.33 | n/a | No Hit | |||
| RAD21_HUMAN | 1.71 | 0.57 | 1.38 | n/a | n/a | |||
| SMC3_HUMAN | 1.20 | -0.06 | 1.74 | n/a | n/a |
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