rs153149 chr5:142059793 A>G
- Sequence
cttgtgagaaggggaagagatctc[A/G]acacccatgcagcctagcccctag
- ASB in cell types
- adrenal gland
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.17 | 0.12 | 1.17 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP diastolic blood pressure (dbp), neuroblastoma (brain cancer), resistance to kuru in aged women despite likely exposure, spine bone mineral density (bmd)
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Brain_Cortex, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Muscle_Skeletal, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid