rs153474 chr5:151258976 C>T

Sequence
catcagacagggtctgttggagtg[C/T]ggagtggtggtcacatgcagtcac
ASB in cell types
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN -1.79 2.73 1.000.01 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin,  homa-ir,  parkinsons disease,  sporadic creutzfeldt-jakob disease,  triglycerides
GTEx eQTL Artery_Tibial,  Esophagus_Mucosa,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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