rs153483 chr5:151251284 G>A
- Sequence
aaatgaagtggtggcccgcaatca[G/A]tctgactggttaatcagaggccga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- IKZF2_HUMAN SPT5H_HUMAN ZN687_HUMAN CDK9_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 3.14 | -3.48 | 1.00 | n/a | n/a | |||
| SPT5H_HUMAN | 1.80 | -0.48 | 1.00 | n/a | n/a | |||
| ZN687_HUMAN | 2.56 | n/a | 1.00 | n/a | n/a | |||
| CDK9_HUMAN | 1.66 | -1.48 | 1.00 | n/a | n/a | |||
| MEF2B_HUMAN | 2.17 | n/a | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood