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rs154748 chr21:18089900 C>A

Sequence
aaatatttatgaaaagttttatag[C/A]ggaagagggttacagactaagaga
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -0.06 1.56 1.001.6·10-6 1.63 n/a No Hit
ANDR_HUMAN -0.03 1.55 1.001.5·10-3 1.40 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd chronic kidney disease obesity with early age of onset (age >2) total cholesterol
GTEx eQTL Artery_Aorta Esophagus_Muscularis Heart_Atrial_Appendage Nerve_Tibial Prostate

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