ADASTRA v5.1.3
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rs154748
chr21:18089900
C
>
A
Sequence
aaatatttatgaaaagttttatag[C/A]ggaagagggttacagactaagaga
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN
ANDR_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
-0.06
1.56
1.00
1.6·10
-6
1.63
n/a
No Hit
ANDR_HUMAN
-0.03
1.55
1.00
1.5·10
-3
1.40
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
chronic kidney disease
,
obesity with early age of onset (age >2)
,
total cholesterol
GTEx eQTL
Artery_Aorta
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Nerve_Tibial
,
Prostate
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)