rs155077 chr13:21297199 T>G
- Sequence
cagctggtggcagcatcactccag[T/G]ccccgcctccatcttcaggtggct
- ASB in cell types
- HCT-116 (colon carcinoma) 2588 (Lymphoblastoid Cell Lines) GM19193 (female B-cells Lymphoblastoid Cell Lines) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.42 | -0.10 | 1.39 | n/a | No Hit | |||
| STAG1_HUMAN | 0.85 | -0.49 | 1.61 | n/a | n/a | |||
| RAD21_HUMAN | 1.81 | -0.10 | 1.33 | n/a | n/a |
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