ADASTRA v5.1.3
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rs1561073
chr3:11600640
T
>
A
Sequence
atacctctgtcagtgtcttatgac[T/A]gaacacaacagtccaagctgactg
ASB in cell types
G401 (rhabdoid tumor of the kidney)
T47D (invasive ductal carcinoma)
HCASMC (Human coronary artery smooth muscle cells)
HEK293 (embryonic kidney)
ASB for transcription factors
TCF21_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN
-0.34
1.79
1.00
6.8·10
-3
1.75
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
EMBL-EBI
lung function (fev1/fvc)
GRASP
cystatin c in serum
,
hdl cholesterol
,
total cholesterol
,
triglycerides
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)