ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs156326
chr20:1825114
G
>
A
Sequence
ttcacttcctgcccgggagttggc[G/A]tagcgcgaatgtccagcattcaga
ASB in cell types
BEAS-2B (bronchial epithelium)
monocyte-derived dendritic cells
ASB for transcription factors
SPI1_HUMAN
GCR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
-0.24
1.33
1.00
9.8·10
-4
1.27
n/a
No Hit
GCR_HUMAN
-0.37
1.53
1.00
0.02
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
fasting blood glucose
,
generalized aggressive periodontitis
,
infant head circumference
,
microalbuminuria
GTEx eQTL
Cells_Cultured_fibroblasts
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)