ADASTRA v5.1.3
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Bill Cipher
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rs156666
chr5:115928156
A
>
G
Sequence
taaaattattttttgcacaaaaag[A/G]gcttctaaacagctttataatgtg
ASB in cell types
HCT-116 (colon carcinoma)
ASB for transcription factors
PEX2_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PEX2_HUMAN
-2.43
2.83
1.00
1.8·10
-3
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
age at death with kuru exposure
,
asthma
,
late onset alzheimers disease
,
neuroblastoma (brain cancer)
,
serum creatinine
GTEx eQTL
Artery_Tibial
,
Brain_Caudate_basal_ganglia
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)