rs1569459 chr6:166382133 A>C
- Sequence
gcccggaggagcgagccactgtca[A/C]ctggcccggagggacgtgcccact
- ASB for transcription factors
- FOXK2_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -0.34 | 2.67 | 1.00 | n/a | n/a | |||
| ESR1_HUMAN | -4.26 | 1.88 | 2.00 | 3.49 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood