rs1573658 chr22:33867374 A>G
- Sequence
ctctgactcatcctgtgggctggg[A/G]ctgttcactcagcagagggaccaa
- ASB in cell types
- HT29 (colon adenocarcinoma)
- ASB for transcription factors
- PPARG_HUMAN HNF4A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PPARG_HUMAN | -2.15 | 2.84 | 2.50 | n/a | No Hit | |||
| HNF4A_HUMAN | 1.94 | -2.64 | 1.42 | n/a | No Hit |
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