rs157982 chr10:78742740 A>G
- Sequence
catccctgctttcacagccttctc[A/G]tcttaggaaaggcccagagcgttc
- ASB in cell types
- VCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| VCaP (prostate carcinoma) | 1.16 | 0.27 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP ldl cholesterol, major depressive disorder, major depressive disorder (broad definition), major depressive disorder (broad definition) (females), major depressive disorder (broad definition) (males), major depressive disorder (narrow definition), major depressive disorder (narrow definition) (females), major depressive disorder (narrow definition) (males), rheumatoid arthritis, salmonella-induced pyroptosis, schizophrenia, sporadic creutzfeldt-jakob disease