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rs158638 chr5:56280189 G>A

Sequence
ccaagcatttttaatccctgactc[G/A]tcaggaagaagaatttggcaaagg
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN NOTC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN n/a 2.88 1.002.4·10-4 3.00 n/a No Hit
NOTC1_HUMAN n/a 2.28 1.000.04 3.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI lung function (fev1/fvc)
GRASP adiponectin levels hdl cholesterol hdl cholesterol change with statins microalbuminuria

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