ADASTRA v5.1.3
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rs158920
chr5:60945441
G
>
A
Sequence
agtgattgcgaggtcagtaaagga[G/A]ggaaaagtgagagcccctagtcaa
ASB in cell types
CD14+ monocytes
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
STAT1_HUMAN
EP300_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.91
n/a
1.7·10
-3
1.00
2.00
n/a
No Hit
EP300_HUMAN
-2.13
2.27
1.00
0.03
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
obesity with early age of onset (age >2)
GTEx eQTL
Adrenal_Gland
,
Artery_Aorta
,
Cells_Cultured_fibroblasts
,
Colon_Transverse
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)